Sir Phillip Tubell c4d6b412ca perf: fix O(n^2) -> O(n) LSH neighbor lookup in dedup ...

Replaced O(n) linear scan `next((n for n in candidates if n["id"] == neighbor_id))` with O(1) dict lookup via pre-built `candidates_by_id`. Also pre-caches `_norm()` results in `norm_cache` to avoid recomputing per inner iteration.

For a 36k-file codebase (~100k high-entropy candidates) this reduces the pass-2 loop from O(n^2*B) (~30–100B iterations) to O(n*B), eliminating the multi-minute CPU hang after AST extraction completes.

2026-06-12 10:31:01 -04:00

..

always_on

feat(skills): progressive-disclosure split for all platforms (generator + drift fence) (#1121)

2026-06-02 20:48:13 +01:00

skills

fix: prevent fuzzy dedup from collapsing distinct same-named symbols on --update (#1178)

2026-06-07 14:26:14 +01:00

__init__.py

Add --wiki export: agent-crawlable knowledge wiki from graph

2026-04-06 16:06:31 +01:00

__main__.py

fix(codebuddy): install SKILL.md in codebuddy install subcommand + fix README hook description

2026-06-07 14:39:16 +01:00

affected.py

fix: four bugs — affected direction, hook root, glob fish/zsh, manifest drift (#1174 #1173 #1172 #1163)

2026-06-07 12:40:44 +01:00

analyze.py

fix: three correctness bugs — cycle hang, label token budget, fuzzy dedup prefix merge

2026-06-08 23:49:16 +01:00

benchmark.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

build.py

fix: guard label/text normalizers against None node labels (#1195)

2026-06-08 23:22:15 +01:00

cache.py

fix: relativize manifest, .graphify_root, and cache source_file fields (#777)

2026-06-03 21:03:06 +01:00

callflow_html.py

release 0.8.24: cross-language semantics, claude-cli fix, edge direction fix, security audit

2026-05-29 02:28:52 +01:00

cluster.py

stabilize community IDs so identical groupings get identical labels (#1090)

2026-06-01 21:54:11 +01:00

command-kilo.md

feat: add Kilo Code support (#512)

2026-06-01 16:05:07 +01:00

dedup.py

perf: fix O(n^2) -> O(n) LSH neighbor lookup in dedup

2026-06-12 10:31:01 -04:00

detect.py

feat: add .slnx solution file support (#1189)

2026-06-08 10:35:32 +01:00

diagnostics.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

export.py

fix: guard label/text normalizers against None node labels (#1195)

2026-06-08 23:22:15 +01:00

extract.py

feat: add .slnx solution file support (#1189)

2026-06-08 10:35:32 +01:00

global_graph.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

google_workspace.py

Harden Google Workspace gws exports (#772)

2026-05-07 20:07:57 +01:00

hooks.py

fix: four bugs — affected direction, hook root, glob fish/zsh, manifest drift (#1174 #1173 #1172 #1163)

2026-06-07 12:40:44 +01:00

ingest.py

security hardening: F-002/F-005/F-007/F-008/F-009/F-010/F-016/F-031/F-035/F-038/PR747-NEW-2

2026-05-07 16:32:26 +01:00

llm.py

fix: three correctness bugs — cycle hang, label token budget, fuzzy dedup prefix merge

2026-06-08 23:49:16 +01:00

manifest.py

perf+fix: parallel extraction, faster imports, bug fixes

2026-04-04 18:56:38 +01:00

mcp_ingest.py

feat: MCP config extractor (.mcp.json, claude_desktop_config.json, mcp.json)

2026-05-26 20:16:41 +01:00

multigraph_compat.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

pg_introspect.py

feat/fix: land PRs #1118 #1110 #1159 #1107 #1103 (graph quality + new features)

2026-06-07 01:20:38 +01:00

prs.py

fix Windows Unicode crash on non-UTF-8 consoles (issue #992)

2026-05-31 00:06:35 +01:00

querylog.py

add query logging to ~/.cache/graphify-queries.log (#1128)

2026-06-03 21:04:01 +01:00

report.py

feat: detect circular import dependencies at file level (#961)

2026-05-30 21:37:47 +01:00

scip_ingest.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

security.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

semantic_cleanup.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

serve.py

fix: guard label/text normalizers against None node labels (#1195)

2026-06-08 23:22:15 +01:00

skill-aider.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-amp.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-claw.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-codex.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-copilot.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-devin.md

fix: four bugs — affected direction, hook root, glob fish/zsh, manifest drift (#1174 #1173 #1172 #1163)

2026-06-07 12:40:44 +01:00

skill-droid.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-kilo.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-kiro.md

fix: four bugs — affected direction, hook root, glob fish/zsh, manifest drift (#1174 #1173 #1172 #1163)

2026-06-07 12:40:44 +01:00

skill-opencode.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-pi.md

fix: four bugs — affected direction, hook root, glob fish/zsh, manifest drift (#1174 #1173 #1172 #1163)

2026-06-07 12:40:44 +01:00

skill-trae.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-vscode.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill-windows.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

skill.md

fix: remove non-spec trigger: field from skill frontmatter (#1180)

2026-06-07 15:49:52 +01:00

symbol_resolution.py

match AST file-level node IDs to the skill.md spec (fixes #1033)

2026-05-31 12:23:56 +01:00

transcribe.py

security: add usedforsecurity=False to MD5/SHA1 hashes used for file diffing and filename generation

2026-05-02 14:32:16 +01:00

tree_html.py

feat(multigraph): add runtime compatibility probe (#956)

2026-05-22 13:22:51 +01:00

validate.py

Add Kimi K2.6 backend, fix phantom god nodes (#598), fix concept file_type (#601)

2026-04-29 08:51:53 +01:00

watch.py

feat/fix: land PRs #1118 #1110 #1159 #1107 #1103 (graph quality + new features)

2026-06-07 01:20:38 +01:00

wiki.py

Fix wiki TypeError on null source_file and skip nested worktrees/ dirs (#1016, #1023)

2026-05-26 09:06:43 +01:00